I'm thinking this has to do with the limitations of fat32 and the fact that the network/usb source drive was formatted as fat32. How this is I don't know because I thought fat32 had a partition size limit much under 1TB. I thought that perhaps this network drive does some sort of software conversion of the files in the background making it appear to get around it. I'm hoping that maybe it will be different if I delete everything and re-transfer it over the network, however I think the network/usb hard drive I'm transferring from is only 100Mbps on the network side so it will be ~4x slower than usb taking the transfer time from ~12 hours to almost 2 days.